Tired of relying on expensive point-and-click GIS software for your geospatial analysis needs? Come and learn how to utilize free open-source Python libraries to implement and automate your raster processing workflows! We will practice raster analysis in Python by conducting a risk assessment and cover the following:
This is a hands-on workshop designed to introduce you to the wonderful world of programming and get you acquainted with the popular and easy-to-use programming language Python. We will provide a whirlwind overview of what Python is, why you might want to use it, and how to do so. Then we'll dive into programming basics and discuss:
This workshop is designed to get you started with the statistical programming language R. We will provide an overview of the R language and the RStudio interface and compare them to other commonly used statistical programs and programming languages. Then we will walk through an R script and cover the following:
Adelaide Rhodes, Senior Bioinformatics Scientist, will be presenting an overview of shotgun metagenomic sequencing data analysis using the Tufts High Performance Computing Cluster.
Jason Laird, Bioinformatics Scientist, will present an overview of 16S Metabarcoding data analysis using the Tufts High Performance Computing Cluster On Demand RStudio.
Jason Laird and Adelaide Rhodes have recently joined the Research Technology Team that maintains the HPC Cluster among other high demand computer resources at Tufts University.
We want to get to know the students, staff and faculty of Tufts, so feel free to drop by during one of our open office hours to get acquainted with our asynchronous, recorded and live training materials or just to ask a question about bioinformatics in general.
We have the ability to help Tufts University affiliates with any sequencing data needs.
Jason Laird and Adelaide Rhodes have recently joined the Research Technology Team that maintains the HPC Cluster among other high demand computer resources at Tufts University.
We want to get to know the students, staff and faculty of Tufts, so feel free to drop by during one of our open office hours to get acquainted with our asynchronous, recorded and live training materials or just to ask a question about bioinformatics in general.
We have the ability to help Tufts University affiliates with any sequencing data needs.
BioCyc is an extensive web portal containing 20,000 genomes and associated metabolic pathways for microbes, model eukaryotes, and humans. The BioCyc website provides extensive bioinformatics tools for searching and analyzing these databases, and leveraging them for analysis of omics datasets.
BioCyc is an extensive web portal containing 20,000 genomes and associated metabolic pathways for microbes, model eukaryotes, and humans. The BioCyc website provides extensive bioinformatics tools for searching and analyzing these databases, and leveraging them for analysis of omics datasets.